Sequence references and accession numbers
This information is also present piecemeal in the lists of available RNA sequences, structures, and protein sequences.
Complete RNA sequences
- R. rubrum M59355 Brown, et al., 1991, J. Bacteriol. 173:3855
- A. tumefaciens M59354 Brown, et al., 1991, J. Bacteriol. 173:3855
- A, eutrophus M59353 Brown, et al., 1991, J. Bacteriol. 173:3855
- T. ferroxidans X16580 Takeshima, et al, 1989, Nucl. Acids Res. 17:9482
- E. coli M17569 Reed, et al, 1982, Cell 30:627
- S. typhimurium M10889 Baer, et al, 1985, Science 228:999
- E. agglomerulans M33657 Lawrence, et al, 1987, PNAS 84:6825
- K. pneumoniae M32719 Lawrence, et al, 1987, PNAS 84:6825
- S. marcescens M33658 Lawrence, et al, 1987, PNAS 84:6825
- P. fluorescens M19024 James, et al, 1988, Cell 52:19
- C. vinosum M59356 Brown, et al., 1991, J. Bacteriol.173:3855
- D. desulfuricans M59357 Brown, et al., 1991, J. Bacteriol. 173:3855
- S. bikiniensis M64290 Haas, et al, 1991, Science 254:853
- B. subtilis M13175 Reich, et al, 1986, J. Biol. Chem. 261:7888
- B. megaterium M19022 James, et al, 1988, Cell 52:19
- B. stearothermophilus M19021 James, et al, 1988, Cell 52:19
- B. brevis M19023 James, et al, 1988, Cell 52:19
- M. fermentans ------------ Banta, Haas, Brown and Pace, unpublished data
- M. hyopneumoniae X69982 Kirsebom, et al, 1994, Mol. Microbiol. (in press)
- M. flocculare X69983 Kirsebom, et al, 1994, Mol. Microbiol. (in press)
- C. limicola L25703 Haas, Brown, Pitulle, and Pace, 1994, PNAS 91:2527
- A. nidulans PCC 6301 X63566 Banta, et al, 1992, Nucl. Acids Res. 20:911
- Anabaena sp. PCC 7120 X65648 Vioque, 1992, NAR 20:6331-6337
- Calothrix sp. PCC 7601 X65649 Vioque, 1992, NAR 20:6331-6337
- Synechocystis sp. PCC 6803 X65707 Vioque, 1992, NAR 20:6331-6337
- Pseudoanabaena PCC6903 X73135 Vioque, unpublished data
- Cyanophora paradoxa ------------ D. Bryant, unpublished data
- B. thetaiotaomicron L25702 Haas, Brown, Pitulle, and Pace, 1994, PNAS 91:2527
- T. roseum ------------ Haas, Pace, and Brown, unpublished data
- D. radiodurans M64708 Haas, et al, 1991, Science 254:853
- T. aquaticus Z15006 Brown, et al.,1992, Nucl. Acids Res. 21:671
- T. thermophilus X60463 Hartmann, et al, 1990, Nucl. Acids Res. 19:5957
- T. maritima M64709 Haas, et al, 1991, Science 254:853
- T. neapolitana Z15043 Brown, et al.,1992, Nucl. Acids Res. 21:671
- H. volcanii M61003 Nieuwlandt, et al, 1991, J. Biol. Chem. 266:5689
- H. cutirubrum ------------ Haas, Armbruster, Brown, and Daniels, unpublished data
- H. trapanicum ------------ Haas, Armbruster, Brown, and Daniels, unpublished data
- H. morrhuae ------------ Haas, Armbruster, Brown, and Daniels, unpublished data
- N. gregoryi ------------ Haas, Armbruster, Brown, and Daniels, unpublished data
- M. barkeri ------------ Haas, Armbruster, Brown, and Daniels, unpublished data
- S. acidocaldarius L13597 LaGrandeur, Darr, Haas, and Pace, 1993, J. Bact 175:5043
- S. cerevisiae MH41 ??????? Morales, et al., 1989, NAR 17:6865-6881
- S. cerevisiae D273 ------------ Martin, unpublished data
- S. fibuligera M69219 Wise & Martin, 1991, JBC 266:19154-19157
- S. exiguus ------------ Martin, unpublished data
- C. glabrata X02168 Shu, et al., 1991, JBC 11:1662-1667
- K. lactis ------------ Wilson, et al., 1989, NAR 17:4485-4491
- S. chevalieri ------------ Martin, unpublished data
- S. diastaticus ------------ Martin, unpublished data
- S. ellipsoideous ------------ Martin, unpublished data
- S. douglasii ------------ Martin, unpublished data
- K. thermotolerans ------------ Martin, unpublished data
- K. fragilis ------------ Martin, unpublished data
- H. sapiens ??????? Baer, et al., 1990, NAR 18:97-103
- X. laevis X56558 Doria, et al., 1991, NAR 19:2315-2320
- S. cerevisiae ??????? Lee & Engelke, 1989, MCB 9:2536-2543
- S. pombe ??????? Krupp, et al., 1986, EMBO J. 5:1697-1703
- S. carlbergensis L12746 Tranuch & Engelke, unpublished data
- S. kluveri ------------ Tranuch & Engelke, unpublished data
- S. globosus L12748 Tranuch & Engelke, unpublished data
- S. octosporus X522531 Tranuch & Engelke, unpublished data
Partial RNA sequences
- P. testosteroni ------------ Brown, Haas, and Pace, unpublished data
- M. xanthus ------------ Brown, Haas, and Pace, unpublished data
- Synechococcus PCC7942 ------------ A. Vioque, unpublished data
- Synechocystis PCC6308 ------------ A. Vioque, unpublished data
- Fisherella UTX1829 ------------ A. Vioque, unpublished data
- Nostoc PCC7107 ------------ A. Vioque, unpublished data
- Nostoc PCC6705 ------------ A. Vioque, unpublished data
- Anabaena ATCC29413 ------------ A. Vioque, unpublished data
- P. staleyi ------------ Haas, Brown, and Pace, unpublished data
- P. maris ------------ Haas, Brown, and Pace, unpublished data
- C. tepidum L25704 Haas, Brown, Pitulle, and Pace, 1994, PNAS 91:2527
- C. psittaci ------------ Haas, Brown, and Pace, unpublished data
- C. trachomatis ------------ Haas, Brown, and Pace, unpublished data
- B. hermsii ------------ Haas, Brown, and Pace, unpublished data
- L. borgpetersenii ------------ Haas, Brown, and Pace, unpublished data
- L. weilii ------------ Haas, Brown, and Pace, unpublished data
- S. aureus ------------ Banta, Haas, Brown and Pace, unpublished data
- C. sporogenes ------------ Banta, Haas, Brown, and Pace, unpublished data
- L. acidophilus ------------ Banta, Haas, Brown, and Pace, unpublished data
- S. facaelis ------------ Banta, Haas, Brown, and Pace, unpublished data
- S. faciem ------------ Banta, Haas, Brown, and Pace, unpublished data
- A. laidlawii ------------ Banta, Haas, Brown, and Pace, unpublished data
- H. mobilis ------------ Banta, Haas, Brown and Pace, unpublished data
- E. thermomarinus ------------ Banta, Haas, Brown and Pace, unpublished data
- M. luteus ------------ Banta, Haas, Brown and Pace, unpublished data
- F. yabuuchiae L25705 Haas, Brown, Pitulle, and Pace, 1994, PNAS 91:2527
- C. aurantiacus ------------ Haas, Brown, and Pace, unpublished data
- H. aurantiacus ------------ Haas, Brown, and Pace, unpublished data
- T. album ------------ Haas, Brown, and Pace, unpublished data
- M thermoautotrophicum DH ------------ Haas and Brown, unpublished data
- M.thermoautotrophicum Marburg ---------- Haas and Brown, unpublished data
- M. fervidus ------------ Haas and Brown, unpublished data
- T. celer AL-1 ------------ Haas and Brown, unpublished data
Natural population/contaminant partial RNA sequences
- Pond Scum #1 U28109 Brown, Rubio, and Pace, unpublished data
- Pond Scum #2 U28103 Brown, Rubio, and Pace, unpublished data
- Pond Scum #4 U28099 Brown, Rubio, and Pace, unpublished data
- Pond Scum #6 U28095 Brown, Rubio, and Pace, unpublished data
- Pond Scum #8 U28104 Brown, Rubio, and Pace, unpublished data
- Pond Scum #22 U28100 Brown, Rubio, and Pace, unpublished data
- Pond Scum #24 U28106 Brown, Rubio, and Pace, unpublished data
- Pond Scum #26 U28105 Brown, Rubio, and Pace, unpublished data
- Pond Scum #27 U28110 Brown, Rubio, and Pace, unpublished data
- Pond Scum #31 U28107 Brown, Rubio, and Pace, unpublished data
- Pond Scum #33 U28111 Brown, Rubio, and Pace, unpublished data
- Lake Griffy A #1 U28108 Brown, Rubio, and Pace, unpublished data
- Lake Griffy A #2 U28113 Brown, Rubio, and Pace, unpublished data
- Lake Griffy A #6 U28114 Brown, Rubio, and Pace, unpublished data
- Lake Griffy A #8 U28112 Brown, Rubio, and Pace, unpublished data
- Lake Griffy A #10 U28118 Brown, Rubio, and Pace, unpublished data
- Lake Griffy B #5 U28115 Brown, Rubio, and Pace, unpublished data
- Lake Griffy B #21 U28116 Brown, Rubio, and Pace, unpublished data
- Lake Griffy B #23 U28117 Brown, Rubio, and Pace, unpublished data
- Lake Griffy B #27 U28079 Brown, Rubio, and Pace, unpublished data
- Lake Griffy B #32 U28080 Brown, Rubio, and Pace, unpublished data
- Lake Griffy B #41 U28081 Brown, Rubio, and Pace, unpublished data
- Lake Griffy W #17 U28082 Brown, Rubio, and Pace, unpublished data
- Lake Griffy W #18 U28083 Brown, Rubio, and Pace, unpublished data
- Lake Griffy W #23 U28084 Brown, Rubio, and Pace, unpublished data
- Lake Griffy W #46 U28085 Brown, Rubio, and Pace, unpublished data
- Lake Griffy W #113 U28086 Brown, Rubio, and Pace, unpublished data
- Lake Griffy W #116 U28087 Brown, Rubio, and Pace, unpublished data
- The Pit #126 U28121 Brown, Rubio, and Pace, unpublished data
- The Pit #131 U28089 Brown, Rubio, and Pace, unpublished data
- Black Hole #145 U28122 Brown, Rubio, and Pace, unpublished data
- Pink Filaments #101 U28120 Brown, Rubio, and Pace, unpublished data
- Electric Monk 14b-11 U28119 Haas, Brown, and Pace, unpublished data
- Electric Monk 14b-9 U28088 Haas, Brown, and Pace, unpublished data
- Mxa1 U28129 Haas, Brown, and Pace, unpublished data
- ESH7-16 U28123 Haas, Brown, and Pace, unpublished data
- ESH7-9 U28125 Haas, Brown, and Pace, unpublished data
- ESH21b-4 U28090 Haas, Brown, and Pace, unpublished data
- ESH17b-7 U28126 Haas, Brown, and Pace, unpublished data
- ESH20b-4 U28124 Haas, Brown, and Pace, unpublished data
- ESH20b-1 U28127 Haas, Brown, and Pace, unpublished data
- ESH30-3 U28092 Haas, Brown, and Pace, unpublished data
- ESH46a-1 U28093 Haas, Brown, and Pace, unpublished data
- ESH26-4 U28091 Haas, Brown, and Pace, unpublished data
- ESH7-4 U28094 Haas, Brown, and Pace, unpublished data
- ESH183D U28098 Haas, Brown, and Pace, unpublished data
- ESH210B U28101 Haas, Brown, and Pace, unpublished data
- ESH212C U28102 Haas, Brown, and Pace, unpublished data
- ESH167E U28096 Haas, Brown, and Pace, unpublished data
- ESH167F U28097 Haas, Brown, and Pace, unpublished data
- vHge3-5 U28128 Haas, Brown, and Pace, unpublished data
- Mxa1 U28130 Haas, Brown, and Pace, unpublished data
Protein sequences
- E. coli M11056 Hansen, et al, 1985, Gene, 38:85
- P. mirabilis M58352 Skovgaard, 1990, Gene 93:27
- B. subtilis X62539 Ogasawara, et al, 1985, EMBO J. 4:3345
- M. luteus M34006 Fujita, et al, 1990, Gene 93:73
- S. bikiniensis M83112 Morse and Schmidt, 1992 Gene 117:61
- B. aphidocola M80817 Lai and Baumann, 1992, Gene 113:175
- Synechocystis PCC6803 ------------ Vioque, unpublished data